Insertion junction: LMJ.RY0402.186855_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.186855
Chromosome:chromosome 5
Location:1202182
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g245350 (1 of 1) IPR003582//IPR009011 - ShKT domain // Mannose-6-phosphate receptor binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCGACGGCGGCAATGAGCAGGAGGAGC
Internal bar code:ATGAGGACCACAAATTCACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:81.0606
LEAP-Seq n confirming:2354
LEAP-Seq n nonconfirming:550
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTGCGTGAAACCTACGG
Suggested primer 2:TGGCTACGCCTTCACTTCTT