Insertion junction: LMJ.RY0402.187019_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.187019
Chromosome:chromosome 2
Location:374865
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g075850 STK12,SNRK2A,SNRK2,STPK12,ARS11 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain; snRK1 family in Chlamydomonas, subgroup 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATCGACGAGCTGCATGCGGAGCACCCC
Internal bar code:TACACGGTGCGTGAGGAGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:99.5887
LEAP-Seq n confirming:1937
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCTATGGGGTACGTGAT
Suggested primer 2:GGATATCTCGCCAACCTCAA