Insertion junction: LMJ.RY0402.187094_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.187094
Chromosome:chromosome 4
Location:2673679
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g223150 NCL1,CLR18,OPR20 (1 of 1) IPR008920 - Transcription regulator FadR/GntR, C-terminal; Nuclear Control of chloroplast Like 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCCGCGTGTAGCAGGCCACGGATGGGC
Internal bar code:CGCGAATGTCTTACGAACTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:78.8177
LEAP-Seq n confirming:1280
LEAP-Seq n nonconfirming:344
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AACGAGTGAGTGAAGGGGTG
Suggested primer 2:TTGACCGAAGCCCATATCTC