Insertion junction: LMJ.RY0402.187334_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.187334
Chromosome:chromosome 13
Location:1415236
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g572050 SMG1 (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1); Nonsense-mediated decay (NMD) pathway protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGGAAGAAGCGGACGGGGCACCGGCC
Internal bar code:TACGAGCGTAGGTACGGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:211
LEAP-Seq percent confirming:99.0196
LEAP-Seq n confirming:505
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACAGCAACACTCCCAAC
Suggested primer 2:AGTATGTGCGGACAGTGCAG