Insertion junction: LMJ.RY0402.187461_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.187461
Chromosome:chromosome 9
Location:5048977
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g398289 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGGGAGCGCACGGTAGGTCACTGCAG
Internal bar code:AAGCCACACGTATGGCCGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:703
LEAP-Seq percent confirming:96.347
LEAP-Seq n confirming:2743
LEAP-Seq n nonconfirming:104
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGAAGGTGGAGATTCGG
Suggested primer 2:TGCACTTGCACATGAGATGA