Insertion junction: LMJ.RY0402.188159_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.188159
Chromosome:chromosome 5
Location:3167259
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239500 FAP38 (1 of 1) IPR000104//IPR009068 - Antifreeze protein, type I // S15/NS1, RNA-binding; Flagellar Associated Protein 38 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGGTTTTGACGGGGGGAGGAGGGGCGA
Internal bar code:GTTATGCGATCAGCTCAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGCACATGTTCAAGCA
Suggested primer 2:ACAATGGCGGTTTTGATAGC