Insertion junction: LMJ.RY0402.188174_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.188174
Chromosome:chromosome 9
Location:5266324
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g399663 FXL7,FXL4 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCTCGGGGCTAATGTCTGGGGCGAGA
Internal bar code:GCGCGAGTCGATAACGTCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:91.8367
LEAP-Seq n confirming:270
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTTTGCACTACGGAAT
Suggested primer 2:CCCCTGTTCAAGAGTGGTGT