Insertion junction: LMJ.RY0402.188379_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.188379
Chromosome:chromosome 1
Location:3988441
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g025950 PPR8 (1 of 1) IPR000209//IPR002885 - Peptidase S8/S53 domain // Pentatricopeptide repeat; PentatricoPeptide Repeat protein 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCAAACAAACCCGAACCCAATGCAAACT
Internal bar code:TAAGCACGCGATATGTTGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:337
LEAP-Seq percent confirming:98.9899
LEAP-Seq n confirming:294
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCATCACGTCAGCACAGC
Suggested primer 2:GGTGTCGCAGTCTCCTAAGC