Insertion junction: LMJ.RY0402.188668_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.188668
Chromosome:chromosome 8
Location:3376825
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g374250 SAG1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Plus agglutinin protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAATGCTCAGCAGCGCTGCCTGAGCCAG
Internal bar code:CTGACTAGGAGTATCGCCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:53.2787
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:114
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTGCTTGATGCGATTTG
Suggested primer 2:TCAGCAGCAGACTGAACTGG