Insertion junction: LMJ.RY0402.188794_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.188794
Chromosome:chromosome 17
Location:3302785
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACTGGCGCCGGTTATTGCAAGTTTGTA
Internal bar code:GCAGACACTCGGTGACTGTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:917
LEAP-Seq percent confirming:99.1013
LEAP-Seq n confirming:8050
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTATCCCCACCCCTACAA
Suggested primer 2:TTTGTGCGCTGTTGGTAAAG