Insertion junction: LMJ.RY0402.188794_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.188794
Chromosome:chromosome 17
Location:3302791
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTCTGCAAAGAACACTGTGCACGCACG
Internal bar code:TATCAGAAGGGCATGACTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:86.5568
LEAP-Seq n confirming:1365
LEAP-Seq n nonconfirming:212
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTATCCCCACCCCTACAA
Suggested primer 2:TTTGTGCGCTGTTGGTAAAG