Insertion junction: LMJ.RY0402.189063_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.189063
Chromosome:chromosome 17
Location:3800574
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGGGTGACAAGCTAGGCAGTTTGTTCC
Internal bar code:AGATGGCAACGGGATAGGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:90.8127
LEAP-Seq n confirming:514
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCATCTTGTCGTGCTGA
Suggested primer 2:GGCTTGGCTAGGACTCACTG