Insertion junction: LMJ.RY0402.189369_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.189369
Chromosome:chromosome 17
Location:5850229
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g739752 FTSHi1,CTAP1,FTSHI1 (1 of 3) IPR000642//IPR003593//IPR003959//IPR027417 - Peptidase M41 // AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; Chloroplast-import FtsH-like ATPase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCAGCCGACCTTGTTTTGCCGAGACCG
Internal bar code:CGGCTGGGCAAGGTACTACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:920
LEAP-Seq percent confirming:99.8951
LEAP-Seq n confirming:952
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGCTCACCTGTCCTTAG
Suggested primer 2:TACCAGCCCAAACTAAACCG