Insertion junction: LMJ.RY0402.189385_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.189385
Chromosome:chromosome 1
Location:2648125
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCTCAATTCAGCCGTCCTGCAAGACTC
Internal bar code:GGGTCCAAGACCATATCGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:874
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGACGGATGATGGTGTG
Suggested primer 2:CACACCTTCCACCCTGTCTT