Insertion junction: LMJ.RY0402.189608_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.189608
Chromosome:chromosome 3
Location:8201824
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACGCCCTGGCGGCCGCATCGTTGGTTC
Internal bar code:AATGGCCGCTGTGGGGAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:794
LEAP-Seq percent confirming:76.7677
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGGTCTATCCCGCAACT
Suggested primer 2:CATCCACGTTCAGTGGTTTG