Insertion junction: LMJ.RY0402.189833_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.189833
Chromosome:chromosome 9
Location:2112010
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTATTCGTGTTAAGTGAAAGGCCCAGT
Internal bar code:AGAACCATGTGGTGCTTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:0.689307
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:5907
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGAGTGAGCGAGTCAGC
Suggested primer 2:GATAAGAGCGTCAAGCGTCC