Insertion junction: LMJ.RY0402.190114_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.190114
Chromosome:chromosome 5
Location:3019128
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g238500 (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGAAGCCCAGGAGGCGCCGAGTGTTGC
Internal bar code:GTTTAACGCCTAAGCTCCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:96.5598
LEAP-Seq n confirming:4940
LEAP-Seq n nonconfirming:176
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTTCATGCGGCTAGTA
Suggested primer 2:CTGGTGTTGCGGGAATAGAT