Insertion junction: LMJ.RY0402.190193_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.190193
Chromosome:chromosome 3
Location:1217748
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g149650 CCD1 related to carotenoid 9%252C10-9'%252C10' cleavage dioxygenase; (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGCGCGGCAAGGAGCCGTCAGAGGGCC
Internal bar code:ACAGCCGTTCTGATGGGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:99.8319
LEAP-Seq n confirming:1188
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGTGCGTACCGATGAC
Suggested primer 2:GTTGGAGGGACGACAGTCAC