Insertion junction: LMJ.RY0402.190312_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.190312
Chromosome:chromosome 16
Location:285210
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACCCACACCGTCTCCCCTTGCTGTTTG
Internal bar code:TTTCCCGGCCGCGGAAATGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:192
LEAP-Seq percent confirming:96.5278
LEAP-Seq n confirming:139
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTGTGTGTGTGTGTGT
Suggested primer 2:TGATCTACGCAACACCGAAA