Insertion junction: LMJ.RY0402.190401_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.190401
Chromosome:chromosome 8
Location:4846998
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g384600 (1 of 2) 3.1.1.81 - Quorum-quenching N-acyl-homoserine lactonase / Quorum-quenching N-acyl homoserine lactone hydrolase gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAAACGCTACAATTAAGGCACTTTCGG
Internal bar code:AGTTTCCCAGTCACGAATCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:736
LEAP-Seq percent confirming:99.5868
LEAP-Seq n confirming:5785
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGCTCTTGTGATGCAA
Suggested primer 2:CATCTGGTGTAACGTCGTGG