Insertion junction: LMJ.RY0402.190428_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.190428
Chromosome:chromosome 5
Location:1765905
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g242400 PGR5 Proton-gradient related; (1 of 1) PTHR35709:SF1 - PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGACGGCGGCCAATCTGTCCGCCGGTGC
Internal bar code:CCCGATATACCCCCTGGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:974
LEAP-Seq percent confirming:99.5392
LEAP-Seq n confirming:432
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTGGCTAGGACTCACTG
Suggested primer 2:ATGATGGGCAACAAGGCTAC