Insertion junction: LMJ.RY0402.190953_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.190953
Chromosome:chromosome 3
Location:8013682
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGCAGCTGATTGTCAGCCAGCCGCAGC
Internal bar code:TGACCTCGCGGTTCGTCCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:99.4527
LEAP-Seq n confirming:1817
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAACGGGGAAGCAATAA
Suggested primer 2:ATAGCATGCTCTCGCACCTT