Insertion junction: LMJ.RY0402.191174_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.191174
Chromosome:chromosome 12
Location:8701947
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g546150 PETM,PETM1 Chloroplast cytochrome b6f PetM subunit; (1 of 1) PF08041 - PetM family of cytochrome b6f complex subunit 7 (PetM) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCTATCCTTGCGGGGCGAGGGCCCATC
Internal bar code:ATCTTTGGCGAAGTTAGGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGCGCTACAGAAAAGG
Suggested primer 2:GCTGAGCTGGCAAAACTACC