Insertion junction: LMJ.RY0402.191579_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.191579
Chromosome:chromosome 12
Location:3717362
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g514750 CIS1 Citrate synthase, mitochondrial; (1 of 1) 2.3.3.1//2.3.3.16 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) // Citrate synthase (unknown stereospecificity) / Oxaloacetate transacetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCGCGCGGAGTCAGAAGCCCGGCCCTC
Internal bar code:CGTCTCTCTGCATGACGGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:99.6305
LEAP-Seq n confirming:809
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATCAGCCACATAGAGGG
Suggested primer 2:TCCTAGGAAGGGTGTTGCAC