Insertion junction: LMJ.RY0402.191764_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.191764
Chromosome:chromosome 12
Location:293070
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g485600 SNRK2M (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCAATGGAACAGTTGAAGTCTGCGCCG
Internal bar code:ATGCCGCAGGCTTAGATCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:75.2898
LEAP-Seq n confirming:1624
LEAP-Seq n nonconfirming:533
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTCGGTTCATTTCCTCC
Suggested primer 2:TTGGGATGGAGAGCCACTAC