Insertion junction: LMJ.RY0402.192048_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.192048
Chromosome:chromosome 9
Location:2527062
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAAGCCCTTGCTCCGCTGCCTCTCCTCC
Internal bar code:CCGCGTCCTTTGCGAGAGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:99.708
LEAP-Seq n confirming:5805
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAAGCAACAGAGGTGAC
Suggested primer 2:TGAAAATTGCACTTGCTTGC