Insertion junction: LMJ.RY0402.192488_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.192488
Chromosome:chromosome 3
Location:1912072
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g155200 CHM1 Chorismate mutase; (1 of 1) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTACAGCACCAGGCCCTGCCCTTCCGGC
Internal bar code:CTTGTGTCGTGAGATTCTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1243
LEAP-Seq percent confirming:99.1448
LEAP-Seq n confirming:1623
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATACACAGTTTCGGGCCTTG
Suggested primer 2:CCTGTAGGCTGACAAGAGGC