Insertion junction: LMJ.RY0402.192637_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.192637
Chromosome:chromosome 16
Location:2906073
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g663800 TPT25,CGL51 Conserved in the Green Lineage; (1 of 1) PTHR11132:SF88 - XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGATTCATACTAGACAATATGTGTAC
Internal bar code:ACACGAAGTGCGGAGGCAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:93.5268
LEAP-Seq n confirming:419
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCCTTGATCTCACTCAC
Suggested primer 2:ACCTTGTGTACCCAGAACGC