Insertion junction: LMJ.RY0402.192797_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.192797
Chromosome:chromosome 3
Location:7968610
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAACCAACAGCTATACTACCTGAGGCG
Internal bar code:AGGAACCGTCTCGACCGTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:90.6674
LEAP-Seq n confirming:3274
LEAP-Seq n nonconfirming:337
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTAGGGCTGGTGTTGC
Suggested primer 2:TCATCCGTACTGCTGCTGTC