Insertion junction: LMJ.RY0402.192849_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.192849
Chromosome:chromosome_16
Location:1172649
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre16.g650600 MST1 Mastigoneme-like flagellar protein sense CDS

Insertion site details

Flanking sequence (orientation from cassette outwards):GCGGCGGCGAACGCAACCTTCAATACCGCG
Internal bar code:GCCCCTCAATTGACGAACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:98.5185
LEAP-Seq n confirming:399
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCACGGAATTAGGCAGC
Suggested primer 2:GTAGGGGCACTTGTAGCAGC