Insertion junction: LMJ.RY0402.192956_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.192956
Chromosome:chromosome 12
Location:4074966
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g517700 NYC1,SDR21 (1 of 2) K13606 - chlorophyll(ide) b reductase (NOL, NYC1); Chlorophyll b reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCCCACACCTGCTTGTTGGCGGTGGTG
Internal bar code:TGGTTTCGGACTCACCAACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:99.6875
LEAP-Seq n confirming:1914
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCTACCTCCTGACCTG
Suggested primer 2:ATTACCACTGCCATCTTCGC