Insertion junction: LMJ.RY0402.193521_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.193521
Chromosome:chromosome 9
Location:3929596
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g392319 VSP6 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCACAGGTACCAGTACCTGATTAAGC
Internal bar code:GGGACCCTAAGAACGCGACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGGACTTGTGGAACT
Suggested primer 2:TTACGCAGTCGCTGTACTGG