Insertion junction: LMJ.RY0402.193587_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.193587
Chromosome:chromosome 12
Location:226570
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g485150 GAP1a,GAP1,GAPC1 (1 of 2) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase; Glyceraldehyde 3-phosphate dehydrogenase, GAPC, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCACTGCAACAAATGTAAGCCCACCGC
Internal bar code:ATGCCGGCGCGAGTCCGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:94.6658
LEAP-Seq n confirming:2804
LEAP-Seq n nonconfirming:158
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGTCCTCCGACTTTGT
Suggested primer 2:GCTGTACAACGCCTTCTTCC