Insertion junction: LMJ.RY0402.193724_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.193724
Chromosome:chromosome 16
Location:4697983
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g687117 (1 of 2) PF14249 - Tocopherol cyclase (Tocopherol_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTATGCTCCATGATCCCACTTGCCCGCC
Internal bar code:ATCGCGCCCAAGGGCTGCCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:93.1153
LEAP-Seq n confirming:541
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAATCACCACACTGCCA
Suggested primer 2:ACCAGTACTGCTGCACAACG