Insertion junction: LMJ.RY0402.193849_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.193849
Chromosome:chromosome 3
Location:9042374
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTACACCTGCCGCCGAGCTACCAAAGAA
Internal bar code:ATAATTTGTTGTTATATGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTTTCACTGACGAGGGT
Suggested primer 2:ACCCTGTTCCTGATCGTTTG