Insertion junction: LMJ.RY0402.193919_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.193919
Chromosome:chromosome 1
Location:5555136
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g039450 (1 of 2) PTHR34548//PTHR34548:SF2 - FAMILY NOT NAMED // PROTEIN TIC 21, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCGGCATGGTAATGCGGTCGGCTTTCG
Internal bar code:CATTACTCCGGGCCTCCTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:98.2618
LEAP-Seq n confirming:2657
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGAAGAAGGACTTGACTG
Suggested primer 2:TTGGGGAGCACTATTTGGAC