Insertion junction: LMJ.RY0402.194146_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.194146
Chromosome:chromosome 13
Location:455066
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGTGCTGCCGATGCACGCATGCTGGCA
Internal bar code:AGGCGGAGTAGGTCACGGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:475
LEAP-Seq percent confirming:99.5918
LEAP-Seq n confirming:1952
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTATCTTGCGGGCTAA
Suggested primer 2:AAGGGGAAGAGAGGATTGGA