Insertion junction: LMJ.RY0402.194729_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.194729
Chromosome:chromosome 5
Location:1108370
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g245900 BCA2 (1 of 1) PTHR11825//PTHR11825:SF46 - SUBGROUP IIII AMINOTRANSFERASE // BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 3, CHLOROPLASTIC; Branched-chain amino acid aminotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTACCCTCGAGGCTCCGCGACCCCCCC
Internal bar code:TGCCTGTCGTCGCAGACGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTAGCAGAAGGCAGGG
Suggested primer 2:CTACTGCTGCTACTGCTGCG