Insertion junction: LMJ.RY0402.194807_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.194807
Chromosome:chromosome 16
Location:1134983
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g650100 PETN Subunit of the chloroplast cytochrome b6f complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCACAGCGCACCTGCGCCCGCTCCATGG
Internal bar code:GCATTCAGTGGCGAGTGCCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:774
LEAP-Seq percent confirming:82.7431
LEAP-Seq n confirming:3131
LEAP-Seq n nonconfirming:653
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAAAAGCCTTCAGCAAG
Suggested primer 2:CGGAATCCTCAACCTGTGTT