Insertion junction: LMJ.RY0402.194933_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.194933
Chromosome:chromosome 5
Location:1962466
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g241638 (1 of 1) IPR000253//IPR002562//IPR012337 - Forkhead-associated (FHA) domain // 3'-5' exonuclease domain // Ribonuclease H-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTCGCTGCGATGCTTCCATAGGGTTCG
Internal bar code:ATGATAAAATAACTATCAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCAGGTAGAGCACTTT
Suggested primer 2:GGAAGACCGCAGACAGAGAC