Insertion junction: LMJ.RY0402.195066_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.195066
Chromosome:chromosome 16
Location:1132266
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCGCCCCCAAATAAAACAAAACACGC
Internal bar code:CTCTTGTTCTGGCACCATGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAAGCTCGTGCGCATAC
Suggested primer 2:GTGCAACACTCCCCATCTTT