Insertion junction: LMJ.RY0402.195154_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.195154
Chromosome:chromosome 16
Location:2906125
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g663800 TPT25,CGL51 Conserved in the Green Lineage; (1 of 1) PTHR11132:SF88 - XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGTTGGCTGTCAGGACCACGATGGGGT
Internal bar code:GCATGGCGCTGCCCACCACTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:900
LEAP-Seq percent confirming:87.1036
LEAP-Seq n confirming:412
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTGTGTACCCAGAACGC
Suggested primer 2:GGAGGGAGCATGTTGTTTGT