Insertion junction: LMJ.RY0402.195413_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.195413
Chromosome:chromosome 3
Location:9043394
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCACCCACGCTGCAGCCCTAGGCACAC
Internal bar code:GCCCGGGCTGGTATATCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:99.7619
LEAP-Seq n confirming:419
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTACACCTGGTAGCCCT
Suggested primer 2:GAAAGCTTCAACAAGCAGGG