Insertion junction: LMJ.RY0402.195677_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.195677
Chromosome:chromosome 6
Location:5083911
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g280650 CGL59,Y3IP1 Chloroplast Ycf3 interacting protein involved in Photosystem I biogensis CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACATGCTGCCGGGCTGGGTCGGGTACG
Internal bar code:CACCCCTGGTGCCGGCCCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:949
LEAP-Seq percent confirming:95.9519
LEAP-Seq n confirming:9007
LEAP-Seq n nonconfirming:380
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCACCCACAGCCTTACT
Suggested primer 2:CTCGTTCAGTCCGTCAGTCA