Insertion junction: LMJ.RY0402.195799_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.195799
Chromosome:chromosome 3
Location:4495724
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g176250 ATPVD1 (1 of 1) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D); Vacuolar ATP synthase subunit D 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTTAGATTCGCTTCACCCAGCTCCTCC
Internal bar code:CAGTCGATAAGACAAGGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:285
LEAP-Seq percent confirming:88.8195
LEAP-Seq n confirming:1422
LEAP-Seq n nonconfirming:179
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGAAGAATCGACCAGCA
Suggested primer 2:AAGCTGCTGTACGAGGAGGA