Insertion junction: LMJ.RY0402.195972_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.195972
Chromosome:chromosome 11
Location:3444423
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g481050 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCGCCTTTGCCTCGTACTCCGCCTTC
Internal bar code:GTGGGTTCGTTCCACAACGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:407
LEAP-Seq percent confirming:99.6252
LEAP-Seq n confirming:2924
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTAATCAAGGCGCAAAC
Suggested primer 2:GTAGGCTCCAGCAAGCATTC