Insertion junction: LMJ.RY0402.196066_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.196066
Chromosome:chromosome 9
Location:5878299
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g402404 (1 of 1) IPR002048//IPR013761 - EF-hand domain // Sterile alpha motif/pointed domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCCTCCACCCCTCATGCCCGGGGGTTC
Internal bar code:AGATTCAAGCTACGGGTATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:80
LEAP-Seq percent confirming:97.7011
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTACACCTCTCCGTACA
Suggested primer 2:TGGATCCTACGGCTGAAATC