Insertion junction: LMJ.RY0402.196083_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.196083
Chromosome:chromosome 16
Location:5107631
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g683953 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGTAGTTGCTGCAGTAGTGCCGGGGG
Internal bar code:GCACTCTATTCGGTTCGCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:99.1758
LEAP-Seq n confirming:361
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCAGTGTCAATAAGGC
Suggested primer 2:ACACCAAGGAACAATCCAGC