Insertion junction: LMJ.RY0402.196315_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.196315
Chromosome:chromosome 5
Location:2295483
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g234650 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACAGGCGGTAACTTGCTGACGGCTCAG
Internal bar code:CGCGACAAATGGCGTGGGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:93.9134
LEAP-Seq n confirming:2407
LEAP-Seq n nonconfirming:156
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTCGTGAACTCGGCGT
Suggested primer 2:CCTCGGTGCTCATCAGGTAT