Insertion junction: LMJ.RY0402.196320_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.196320
Chromosome:chromosome 5
Location:2571944
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g236050 (1 of 2) IPR015097 - Lung surfactant protein D coiled-coil trimerisation CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAACGCACGCCGGCAGGCGGAGGAGCTC
Internal bar code:CTCAACCACAGACGAGCGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:47
LEAP-Seq percent confirming:56.8182
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTGGTTTGATGTTCTG
Suggested primer 2:ATAAAGAGGCGCATGCAAGT